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scverse / scirpy Public

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Improve GPU Hamming distance computation - #723

#723

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felixpetschko wants to merge 28 commits into

scverse:mainscverse/scirpy:mainfrom

felixpetschko:performance/gpu-hamming-improvementsfelixpetschko/scirpy:performance/gpu-hamming-improvementsCopy head branch name to clipboard

Conversation Commits28 (28)Checks Files changed

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Improve GPU Hamming distance computation#723
felixpetschko wants to merge 28 commits into
scverse:mainfrom
felixpetschko:performance/gpu-hamming-improvements

Adapt input array memory management

7feb2b4

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conda on: pull_request 1

test (ubuntu-latest, 3.14)

Check Build on: pull_request

package

Test on: pull_request 1

get-environments

hatch-test.py3.12-stable

hatch-test.py3.14-stable

hatch-test.py3.12-minver

hatch-test.py3.14-pre (PRE-RELEASE DEPENDENCIES)

Tests pass in all hatch environments

GPU-CI on: pull_request

Triage: Check if GPU tests are allowed to run

GPU Tests

Test tutorials on: pull_request

test (tutorial_3k_tcr.ipynb, ubuntu-latest)

test (tutorial_io.ipynb, ubuntu-latest)

test (tutorial_5k_bcr.ipynb, ubuntu-latest)

Cirun Application

Cirun

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1 warning

Setup Miniconda

warning libmamba 'repo.anaconda.com', a commercial channel hosted by Anaconda.com, is used. warning libmamba Please make sure you understand Anaconda Terms of Services. warning libmamba See: https://legal.anaconda.com/policies/en/

test (ubuntu-latest, 3.14)

succeeded Jul 26, 2026 in 3m 30s

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