refactor(features)!: collapse consensus features, repair reduced-feature CI, and structural fixes (1/6) - #458

Merged

nh13 merged 4 commits into

feat-runallfrom

nh/runall-fix-1-foundation

Jun 25, 2026

Commits on Jun 25, 2026

refactor(features)!: collapse consensus features into one `consensus` flag and repair reduced-feature CI
nh13
committed
a591e86
fix(cli): accept removed --scheduler as a hidden deprecated no-op
nh13
committed
d74a450
refactor(pipeline-core): hoist FinalizeHook trait to single-source the sort hooks
nh13
committed
2b49d89
fix(bam-io): fix BAI sidecar path naming for non-.bam outputs
nh13
committed
12ef53a