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hgc: PipelineConfig.n_partitions is accepted, printed in the run plan, and consumed by nothing

Status: Open.

#208 In bigbio/hvantk;

· enriquea opened on Jul 14, 2026

hgc: vds2mt inherits a reference-block-derived partition layout, so densify/QC stop scaling at 32 cores

Status: Open.

#207 In bigbio/hvantk;

· enriquea opened on Jul 14, 2026

HGC QC: cap the module at computation; retire the QC plotting layer

clean-up

Status: Open.

Task

#205 In bigbio/hvantk;

· enriquea opened on Jul 13, 2026

PTM dataset build path: uniprot-ptm key bug, cptac reprocess wiring, deps & resilience

Status: Open.

#198 In bigbio/hvantk;

· enriquea opened on Jul 2, 2026

Follow-up: deferred review findings from release #184 (catalog metadata + minor polish)

enhancementNew feature or requestNew feature or request

Status: Open.

#185 In bigbio/hvantk;

· enriquea opened on Jun 2, 2026

Declare plugin data-acquisition policy explicitly in plugin.yaml

Status: Open.

#118 In bigbio/hvantk;

· enriquea opened on May 27, 2026

Validate plugin-author UX: walk one new plugin through agent-driven authoring

Status: Open.

#112 In bigbio/hvantk;

· enriquea opened on May 26, 2026

PTM-EDA: PhosphoSitePlus LTP-tier stratification to test functional-site vs detection-bias signal

enhancementNew feature or requestNew feature or request

Status: Open.

#95 In bigbio/hvantk;

· enriquea opened on Apr 18, 2026

Explore applicability of MultiQC for visualization of QC output

enhancementNew feature or requestNew feature or request

questionFurther information is requestedFurther information is requested

Status: Open.

#33 In bigbio/hvantk;

· enriquea opened on Nov 7, 2025