Trigger release v2.0.2 - #251
Merged
Merged
Conversation
Mark uniprot_sprot.dat.gz and uniprot_trembl.dat.gz as temp so Snakemake removes them after use, freeing ~200GB of disk space. Closes #248 Co-authored-by: jonasfreimuth <68993915+jonasfreimuth@users.noreply.github.com>
Contributor
There was a problem hiding this comment.
Pull request overview
This PR updates the UniProt snapshot extraction step in the pull_resources stage of the Snakemake workflow, aligning intermediate UniProt artifacts with the workflow’s pattern of cleaning up non-final resources during/after execution.
Changes:
- Mark
uniprot_sprot.dat.gzanduniprot_trembl.dat.gzoutputs fromextract_uniprot_snapshotas temporary files (temp(...)), so they can be automatically removed when no longer needed.
💡 Add a code-review agent skill or configure MCP servers for context-aware, tailored reviews. Learn more in the docs.
LKress
approved these changes
Aug 26, 2026
jonasfreimuth
temporarily deployed
to
github-pages
August 26, 2026 08:46 — with
GitHub Actions
Inactive
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
No description provided.