Skip to content

docs: Update section on download of pre-built indices #227

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Draft
LKress wants to merge 1 commit into
base: main
Choose a base branch
from
Draft

docs: Update section on download of pre-built indices #227

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
14 changes: 10 additions & 4 deletions README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -51,16 +51,22 @@ soon available for download via

```sh
# human
wget ftp://easyfuse.tron-mainz.de/oblx/v1.0.0/human/GRCh38_49
wget -recursive --no-host-directories ftp://easyfuse.tron-mainz.de/oblx/v1.0.0/human/GRCh38_49

# mouse
wget ftp://easyfuse.tron-mainz.de/oblx/v1.0.0/mouse/GRCm39_M36
wget --recursive --no-host-directories ftp://easyfuse.tron-mainz.de/oblx/v1.0.0/mouse/GRCm39_M36
```

To verify the files run
To verify the files run (to setup gpg key see \[TODO\](TODO: add link))

```sh
sha256sum -c CHECKSUM_FILE
# go to respective directory (mouse in case of mouse)
cd oblx/v1.0.0/human
# download the respective checksum
wget ftp://easyfuse.tron-mainz.de/oblx/v1.0.0/human/GRCh38_49.checksum.txt
wget ftp://easyfuse.tron-mainz.de/oblx/v1.0.0/human/GRCh38_49.checksum.txt.sig

sha256sum -c GRCh38_49.checksum.txt
```

## Usage
Expand Down
14 changes: 10 additions & 4 deletions docs/oblx/docs/index.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -29,16 +29,22 @@ soon available for download via

```sh
# human
wget ftp://easyfuse.tron-mainz.de/oblx/v1.0.0/human/GRCh38_49
wget -recursive --no-host-directories ftp://easyfuse.tron-mainz.de/oblx/v1.0.0/human/GRCh38_49

# mouse
wget ftp://easyfuse.tron-mainz.de/oblx/v1.0.0/mouse/GRCm39_M36
wget --recursive --no-host-directories ftp://easyfuse.tron-mainz.de/oblx/v1.0.0/mouse/GRCm39_M36
```

To verify the files run
To verify the files run (to setup gpg key see \[TODO\](TODO: add link))

```sh
sha256sum -c checksum.txt
# go to respective directory (mouse in case of mouse)
cd oblx/v1.0.0/human
# download the respective checksum
wget ftp://easyfuse.tron-mainz.de/oblx/v1.0.0/human/GRCh38_49.checksum.txt
wget ftp://easyfuse.tron-mainz.de/oblx/v1.0.0/human/GRCh38_49.checksum.txt.sig

sha256sum -c GRCh38_49.checksum.txt
```

## Installation
Expand Down
Loading