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Ven hma dia phosphoproteomics
- #42
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Ven hma dia phosphoproteomics
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LDAY26
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PNNL-CompBio/amlMultidrugResistance:ven_hma_DIA-phosphoproteomics
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Commits on Apr 29, 2026
Phosphosite raw data cleaning and normalization
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Use Limma to compare patients with different outcomes
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Kinase Substrate Enrichment Analysis and associated plot
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Update 01_Phosphosite_data_processing.R
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Gene Set Enrichment Analysis and associated plot
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Analysis on Human:Ecoli phosphopeptide dilution experiment
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Commits on Jun 9, 2026
Update 03_KSEA_and_KSEAplot.R
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Update 01_Phosphosite_data_processing.R
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Update 03_KSEA_and_KSEAplot.R
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Update 02_LimmaStats.R
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Update 04_GSEA_and_GSEAplot.R
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Commits on Jun 10, 2026
added additional plotting ideas.
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Merge branch 'ven_hma_DIA-phosphoproteomics' of https://github.com/PNNL-CompBio/amlMultidrugResistance into ven_hma_DIA-phosphoproteomics
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