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package hdf5
import (
"fmt"
"os"
"testing"
"github.com/stretchr/testify/require"
)
// TestFullWriteWorkflow_GroupsAndDatasets tests creating groups and datasets together.
// This demonstrates the full write infrastructure even though linking is not yet implemented.
func TestFullWriteWorkflow_GroupsAndDatasets(t *testing.T) {
testFile := "test_full_write_workflow.h5"
defer func() { _ = os.Remove(testFile) }()
// Create file
fw, err := CreateForWrite(testFile, CreateTruncate)
require.NoError(t, err)
defer func() { _ = fw.Close() }()
// Create groups (MVP: not linked, but structure is valid)
_, err = fw.CreateGroup("/data")
require.NoError(t, err)
// Create datasets (MVP: not linked, but structure is valid)
ds1, err := fw.CreateDataset("/temperature", Int32, []uint64{10})
require.NoError(t, err)
data1 := []int32{20, 21, 22, 23, 24, 25, 26, 27, 28, 29}
err = ds1.Write(data1)
require.NoError(t, err)
ds2, err := fw.CreateDataset("/pressure", Float64, []uint64{5})
require.NoError(t, err)
data2 := []float64{1.1, 2.2, 3.3, 4.4, 5.5}
err = ds2.Write(data2)
require.NoError(t, err)
// Close file
err = fw.Close()
require.NoError(t, err)
// Reopen and verify file is valid HDF5
f, err := Open(testFile)
require.NoError(t, err)
defer func() { _ = f.Close() }()
// Verify root group exists
root := f.Root()
require.NotNil(t, root)
// MVP Limitation: Datasets and groups are not linked to root yet
// So we can't access them via root.Children() or f.OpenDataset()
// But the file structure is valid and can be reopened
}
// TestFullWriteWorkflow_MultipleDatasets tests writing multiple datasets with different types.
func TestFullWriteWorkflow_MultipleDatasets(t *testing.T) {
testFile := "test_multiple_datasets.h5"
defer func() { _ = os.Remove(testFile) }()
fw, err := CreateForWrite(testFile, CreateTruncate)
require.NoError(t, err)
defer func() { _ = fw.Close() }()
// Create datasets with different types
tests := []struct {
name string
dt Datatype
dims []uint64
data interface{}
}{
{
name: "int8_dataset",
dt: Int8,
dims: []uint64{5},
data: []int8{1, 2, 3, 4, 5},
},
{
name: "uint32_dataset",
dt: Uint32,
dims: []uint64{3},
data: []uint32{100, 200, 300},
},
{
name: "float32_dataset",
dt: Float32,
dims: []uint64{4},
data: []float32{1.5, 2.5, 3.5, 4.5},
},
{
name: "2d_matrix",
dt: Int32,
dims: []uint64{2, 3},
data: []int32{1, 2, 3, 4, 5, 6},
},
}
for _, tt := range tests {
t.Run(tt.name, func(t *testing.T) {
ds, err := fw.CreateDataset("/"+tt.name, tt.dt, tt.dims)
require.NoError(t, err)
err = ds.Write(tt.data)
require.NoError(t, err)
})
}
// Close and verify
err = fw.Close()
require.NoError(t, err)
// Verify file is valid
f, err := Open(testFile)
require.NoError(t, err)
defer func() { _ = f.Close() }()
require.NotNil(t, f.Root())
}
// TestFullWriteWorkflow_BinaryStructure verifies the binary file structure.
func TestFullWriteWorkflow_BinaryStructure(t *testing.T) {
testFile := "test_binary_structure.h5"
defer func() { _ = os.Remove(testFile) }()
fw, err := CreateForWrite(testFile, CreateTruncate)
require.NoError(t, err)
// Create a group
_, err = fw.CreateGroup("/mygroup")
require.NoError(t, err)
// Create a dataset
ds, err := fw.CreateDataset("/mydata", Float64, []uint64{3})
require.NoError(t, err)
err = ds.Write([]float64{1.0, 2.0, 3.0})
require.NoError(t, err)
err = fw.Close()
require.NoError(t, err)
// Read raw file and verify structures
data, err := os.ReadFile(testFile)
require.NoError(t, err)
// Must contain HDF5 signature
require.Equal(t, []byte{0x89, 'H', 'D', 'F', '\r', '\n', 0x1a, '\n'}, data[0:8], "HDF5 signature")
// Must contain OHDR (object headers)
require.Contains(t, string(data), "OHDR", "object headers")
// Must contain group structures (from CreateGroup)
require.Contains(t, string(data), "HEAP", "local heap for group names")
require.Contains(t, string(data), "TREE", "B-tree for group indexing")
require.Contains(t, string(data), "SNOD", "symbol table node")
// File size should be reasonable (not huge)
// OHDR padding (256 bytes per object) increases file size slightly.
require.Less(t, len(data), 12*1024, "file size should be < 12KB for this small file")
}
// TestFullWriteWorkflow_ErrorCases tests error handling.
func TestFullWriteWorkflow_ErrorCases(t *testing.T) {
testFile := "test_error_cases.h5"
defer func() { _ = os.Remove(testFile) }()
fw, err := CreateForWrite(testFile, CreateTruncate)
require.NoError(t, err)
defer func() { _ = fw.Close() }()
// Error: Create dataset with mismatched data
ds, err := fw.CreateDataset("/test", Int32, []uint64{5})
require.NoError(t, err)
// Wrong type
err = ds.Write([]float64{1.0, 2.0, 3.0})
require.Error(t, err)
require.Contains(t, err.Error(), "unsupported data type")
// Wrong size
err = ds.Write([]int32{1, 2, 3}) // Expected 5, got 3
require.Error(t, err)
require.Contains(t, err.Error(), "data size mismatch")
}
// TestFullWriteWorkflow_CloseAndReopen tests write-close-reopen cycle.
func TestFullWriteWorkflow_CloseAndReopen(t *testing.T) {
testFile := "test_close_reopen.h5"
defer func() { _ = os.Remove(testFile) }()
// Write phase
{
fw, err := CreateForWrite(testFile, CreateTruncate)
require.NoError(t, err)
// Create group
_, err = fw.CreateGroup("/data")
require.NoError(t, err)
// Create dataset
ds, err := fw.CreateDataset("/values", Int32, []uint64{5})
require.NoError(t, err)
err = ds.Write([]int32{10, 20, 30, 40, 50})
require.NoError(t, err)
// Close
err = fw.Close()
require.NoError(t, err)
}
// Read phase
{
f, err := Open(testFile)
require.NoError(t, err)
defer func() { _ = f.Close() }()
// Verify file structure
root := f.Root()
require.NotNil(t, root)
// MVP: Can't access datasets/groups yet (not linked)
// But file is valid and can be reopened
}
// Verify file still exists and is valid
info, err := os.Stat(testFile)
require.NoError(t, err)
require.Greater(t, info.Size(), int64(100), "file should not be empty")
}
// TestFullWriteWorkflow_WithDiscovery tests full write-close-reopen-discover cycle.
// This is the comprehensive test that validates Component 3 is complete.
func TestFullWriteWorkflow_WithDiscovery(t *testing.T) {
testFile := "test_discovery.h5"
defer func() { _ = os.Remove(testFile) }()
// Write phase
fw, err := CreateForWrite(testFile, CreateTruncate)
require.NoError(t, err)
// Create groups
_, err = fw.CreateGroup("/data")
require.NoError(t, err)
// Create datasets
ds1, err := fw.CreateDataset("/temperature", Int32, []uint64{10})
require.NoError(t, err)
err = ds1.Write([]int32{20, 21, 22, 23, 24, 25, 26, 27, 28, 29})
require.NoError(t, err)
ds2, err := fw.CreateDataset("/pressure", Float64, []uint64{5})
require.NoError(t, err)
err = ds2.Write([]float64{1.1, 2.2, 3.3, 4.4, 5.5})
require.NoError(t, err)
err = fw.Close()
require.NoError(t, err)
// Read phase - verify discovery
f, err := Open(testFile)
require.NoError(t, err)
defer func() { _ = f.Close() }()
// Verify root group exists and has children
root := f.Root()
require.NotNil(t, root)
// Verify can list children (discovery works!)
children := root.Children()
require.Len(t, children, 3, "should have exactly 3 children")
// Check child names
childNames := make([]string, len(children))
for i, child := range children {
childNames[i] = child.Name()
}
require.Contains(t, childNames, "temperature", "temperature dataset should be discoverable")
require.Contains(t, childNames, "pressure", "pressure dataset should be discoverable")
require.Contains(t, childNames, "data", "data group should be discoverable")
// Find and verify temperature dataset
var tempDataset *Dataset
for _, child := range children {
if child.Name() == "temperature" {
ds, ok := child.(*Dataset)
require.True(t, ok, "temperature should be a Dataset")
tempDataset = ds
break
}
}
require.NotNil(t, tempDataset, "temperature dataset should be found")
// Verify can read data back
tempData, err := tempDataset.Read()
require.NoError(t, err)
// Convert to int32 (Read returns []float64)
tempInt32 := make([]int32, len(tempData))
for i, v := range tempData {
tempInt32[i] = int32(v)
}
require.Equal(t, []int32{20, 21, 22, 23, 24, 25, 26, 27, 28, 29}, tempInt32)
// Find and verify pressure dataset
var presDataset *Dataset
for _, child := range children {
if child.Name() == "pressure" {
ds, ok := child.(*Dataset)
require.True(t, ok, "pressure should be a Dataset")
presDataset = ds
break
}
}
require.NotNil(t, presDataset, "pressure dataset should be found")
presData, err := presDataset.Read()
require.NoError(t, err)
require.Equal(t, []float64{1.1, 2.2, 3.3, 4.4, 5.5}, presData)
// Find and verify data group
var dataGroup *Group
for _, child := range children {
if child.Name() == "data" {
grp, ok := child.(*Group)
require.True(t, ok, "data should be a Group")
dataGroup = grp
break
}
}
require.NotNil(t, dataGroup, "data group should be found")
require.Equal(t, "data", dataGroup.Name())
// Verify Walk traverses the tree
visited := []string{}
f.Walk(func(path string, _ Object) {
visited = append(visited, path)
})
require.Contains(t, visited, "/")
require.Contains(t, visited, "/data/")
require.Contains(t, visited, "/temperature")
require.Contains(t, visited, "/pressure")
}
// TestFullWriteWorkflow_MultipleObjects tests creating many objects.
func TestFullWriteWorkflow_MultipleObjects(t *testing.T) {
testFile := "test_multiple_objects.h5"
defer func() { _ = os.Remove(testFile) }()
fw, err := CreateForWrite(testFile, CreateTruncate)
require.NoError(t, err)
// Create 10 datasets
for i := 0; i < 10; i++ {
name := fmt.Sprintf("/dataset_%d", i)
ds, err := fw.CreateDataset(name, Int32, []uint64{3})
require.NoError(t, err)
data := []int32{int32(i), int32(i + 1), int32(i + 2)}
err = ds.Write(data)
require.NoError(t, err)
}
err = fw.Close()
require.NoError(t, err)
// Verify all datasets are discoverable
f, err := Open(testFile)
require.NoError(t, err)
defer func() { _ = f.Close() }()
children := f.Root().Children()
require.Equal(t, 10, len(children), "should have 10 datasets")
// Create map of datasets by name for easier lookup
datasetMap := make(map[string]*Dataset)
for _, child := range children {
ds, ok := child.(*Dataset)
require.True(t, ok, "child should be a Dataset")
datasetMap[child.Name()] = ds
}
// Verify can read each dataset
for i := 0; i < 10; i++ {
name := fmt.Sprintf("dataset_%d", i)
ds, found := datasetMap[name]
require.True(t, found, "dataset %s should be found", name)
data, err := ds.Read()
require.NoError(t, err)
// Convert to int32
dataInt32 := make([]int32, len(data))
for j, v := range data {
dataInt32[j] = int32(v)
}
require.Equal(t, []int32{int32(i), int32(i + 1), int32(i + 2)}, dataInt32)
}
}