From 3fd712b840a90aa7c6eb07b0d2957a974eb6e90e Mon Sep 17 00:00:00 2001 From: Tarun Bali Date: Thu, 16 Jul 2026 13:23:47 +0000 Subject: [PATCH 1/9] fixed dataframe columns rendering in NOAA_GPCC_StandardardizedPrecipitationIndex --- scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py b/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py index 7c5f726c93..a2712ae141 100644 --- a/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py +++ b/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py @@ -79,7 +79,7 @@ def nc_to_df(nc_path, period, spi_col, start_date, end_date): df['period'] = f'"[{int(period)} dcs:Monthly]"' # Adding observation period in output csv df['observationPeriod'] = f'P{int(period)}M' - df['place'] = df[['lat', 'lon']].apply(to_one_degree_grid_place, axis=1) + df['place'] = df[['lat', 'lon']].apply(to_one_degree_grid_place, axis=1, raw=True) df = df.drop('lat', axis=1) df = df.drop('lon', axis=1) return df From a1191683d8b13e213bc4302ea017058a134adf76 Mon Sep 17 00:00:00 2001 From: Tarun Bali Date: Thu, 16 Jul 2026 13:44:16 +0000 Subject: [PATCH 2/9] fixed dataframe columns rendering in NOAA_GPCC_StandardardizedPrecipitationIndex --- scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py | 13 +++---------- 1 file changed, 3 insertions(+), 10 deletions(-) diff --git a/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py b/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py index a2712ae141..1a56bbe607 100644 --- a/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py +++ b/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py @@ -49,15 +49,6 @@ 'Dash separated start date. Defaults to the running date.') -def to_one_degree_grid_place(latlon): - """Latlng data to grid format. - - Change longitude from 0 ~ 360 scale to -180 ~ 180 scale. - Change coordinate from middle of the grid to north west point of the grid. - """ - return f'grid_1/{math.floor(latlon[0])}_{math.floor((latlon[1]+180)%360 - 180)}' - - def nc_to_df(nc_path, period, spi_col, start_date, end_date): """Read a netcdf and parse to df.""" logging.info(f"Read a netcdf file - {nc_path} and parse to df.") @@ -79,7 +70,9 @@ def nc_to_df(nc_path, period, spi_col, start_date, end_date): df['period'] = f'"[{int(period)} dcs:Monthly]"' # Adding observation period in output csv df['observationPeriod'] = f'P{int(period)}M' - df['place'] = df[['lat', 'lon']].apply(to_one_degree_grid_place, axis=1, raw=True) + lat_floor = (df['lat'] // 1).astype(int) + lon_floor = (((df['lon'] + 180) % 360 - 180) // 1).astype(int) + df['place'] = 'grid_1/' + lat_floor.astype(str) + '_' + lon_floor.astype(str) df = df.drop('lat', axis=1) df = df.drop('lon', axis=1) return df From 1e8a3f46fd7861794833ffd98159f2da94fea4ad Mon Sep 17 00:00:00 2001 From: Tarun Bali Date: Thu, 16 Jul 2026 13:50:37 +0000 Subject: [PATCH 3/9] adding comments --- scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py | 3 +++ 1 file changed, 3 insertions(+) diff --git a/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py b/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py index 1a56bbe607..3b3d59c097 100644 --- a/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py +++ b/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py @@ -70,6 +70,9 @@ def nc_to_df(nc_path, period, spi_col, start_date, end_date): df['period'] = f'"[{int(period)} dcs:Monthly]"' # Adding observation period in output csv df['observationPeriod'] = f'P{int(period)}M' + # Convert latitude and longitude to 1-degree grid format. + # Longitude is converted from 0-360 scale to -180-180 scale. + # Coordinates are floored to map them to the grid's corner. lat_floor = (df['lat'] // 1).astype(int) lon_floor = (((df['lon'] + 180) % 360 - 180) // 1).astype(int) df['place'] = 'grid_1/' + lat_floor.astype(str) + '_' + lon_floor.astype(str) From 0a977e2da1e5bc6408952c8521fb27c4eecd54eb Mon Sep 17 00:00:00 2001 From: Tarun Bali Date: Thu, 16 Jul 2026 13:58:14 +0000 Subject: [PATCH 4/9] adding comments --- scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py b/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py index 3b3d59c097..9a8069da8d 100644 --- a/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py +++ b/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py @@ -75,7 +75,8 @@ def nc_to_df(nc_path, period, spi_col, start_date, end_date): # Coordinates are floored to map them to the grid's corner. lat_floor = (df['lat'] // 1).astype(int) lon_floor = (((df['lon'] + 180) % 360 - 180) // 1).astype(int) - df['place'] = 'grid_1/' + lat_floor.astype(str) + '_' + lon_floor.astype(str) + df['place'] = 'grid_1/' + lat_floor.astype(str) + '_' + lon_floor.astype( + str) df = df.drop('lat', axis=1) df = df.drop('lon', axis=1) return df From 3ea1374be7e69dbc3f847f230551db9097fed094 Mon Sep 17 00:00:00 2001 From: TarunBali Date: Thu, 16 Jul 2026 22:20:16 +0530 Subject: [PATCH 5/9] Update scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py Co-authored-by: gemini-code-assist[bot] <176961590+gemini-code-assist[bot]@users.noreply.github.com> --- scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py b/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py index 9a8069da8d..43bcc901e7 100644 --- a/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py +++ b/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py @@ -75,8 +75,9 @@ def nc_to_df(nc_path, period, spi_col, start_date, end_date): # Coordinates are floored to map them to the grid's corner. lat_floor = (df['lat'] // 1).astype(int) lon_floor = (((df['lon'] + 180) % 360 - 180) // 1).astype(int) - df['place'] = 'grid_1/' + lat_floor.astype(str) + '_' + lon_floor.astype( - str) + df['place'] = ( + 'grid_1/' + lat_floor.astype(str) + '_' + lon_floor.astype(str) + ) df = df.drop('lat', axis=1) df = df.drop('lon', axis=1) return df From 870cf157b5775b8d2b9073c0aa0b5d8a6f6287d7 Mon Sep 17 00:00:00 2001 From: Tarun Bali Date: Thu, 16 Jul 2026 17:02:06 +0000 Subject: [PATCH 6/9] adding comments --- scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py b/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py index 43bcc901e7..27e18f72e2 100644 --- a/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py +++ b/scripts/noaa/gpcc_spi/preprocess_gpcc_spi.py @@ -75,9 +75,8 @@ def nc_to_df(nc_path, period, spi_col, start_date, end_date): # Coordinates are floored to map them to the grid's corner. lat_floor = (df['lat'] // 1).astype(int) lon_floor = (((df['lon'] + 180) % 360 - 180) // 1).astype(int) - df['place'] = ( - 'grid_1/' + lat_floor.astype(str) + '_' + lon_floor.astype(str) - ) + df['place'] = ('grid_1/' + lat_floor.astype(str) + '_' + + lon_floor.astype(str)) df = df.drop('lat', axis=1) df = df.drop('lon', axis=1) return df From 04b768dd46784489fad8655d1c34cc45f300574c Mon Sep 17 00:00:00 2001 From: Tarun Bali Date: Mon, 20 Jul 2026 10:14:44 +0000 Subject: [PATCH 7/9] adding goldens for NOAA GPCC --- ...lden_observations_gpcc_spi_aggregation.csv | 4329 +++++++++++++++++ ...ort_drought_spi_9m_polygon_place_svobs.csv | 3 + ...ry_report_drought_spi_9m_polygon_svobs.csv | 3 + .../golden_summary_report_gpcc_spi.csv | 7 + ...en_summary_report_gpcc_spi_aggregation.csv | 7 + scripts/noaa/gpcc_spi/manifest.json | 8 +- scripts/noaa/gpcc_spi/validation_config.json | 56 + 7 files changed, 4412 insertions(+), 1 deletion(-) create mode 100644 scripts/noaa/gpcc_spi/golden_data/golden_observations_gpcc_spi_aggregation.csv create mode 100644 scripts/noaa/gpcc_spi/golden_data/golden_summary_report_drought_spi_9m_polygon_place_svobs.csv create mode 100644 scripts/noaa/gpcc_spi/golden_data/golden_summary_report_drought_spi_9m_polygon_svobs.csv create mode 100644 scripts/noaa/gpcc_spi/golden_data/golden_summary_report_gpcc_spi.csv create mode 100644 scripts/noaa/gpcc_spi/golden_data/golden_summary_report_gpcc_spi_aggregation.csv create mode 100644 scripts/noaa/gpcc_spi/validation_config.json diff --git a/scripts/noaa/gpcc_spi/golden_data/golden_observations_gpcc_spi_aggregation.csv b/scripts/noaa/gpcc_spi/golden_data/golden_observations_gpcc_spi_aggregation.csv new file mode 100644 index 0000000000..1f51ea7694 --- /dev/null +++ b/scripts/noaa/gpcc_spi/golden_data/golden_observations_gpcc_spi_aggregation.csv @@ -0,0 +1,4329 @@ +"place" +"geoId/18099" +"geoId/26069" +"geoId/02090" +"geoId/01047" +"geoId/29023" +"geoId/01023" +"geoId/18003" +"geoId/37113" +"geoId/28105" +"geoId/21183" +"geoId/17195" +"geoId/37105" +"geoId/27127" 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b/scripts/noaa/gpcc_spi/golden_data/golden_summary_report_drought_spi_9m_polygon_place_svobs.csv @@ -0,0 +1,3 @@ +"ScalingFactors","Units","MinDate","observationPeriods","StatVar","MeasurementMethods","NumPlaces" +"[]","[SquareKilometer]","2010","[P1Y, P1M]","Area_DroughtEvent","[]","14770" +"[]","[]","2010","[P1Y, P1M]","Count_DroughtEvent","[]","14770" diff --git a/scripts/noaa/gpcc_spi/golden_data/golden_summary_report_drought_spi_9m_polygon_svobs.csv b/scripts/noaa/gpcc_spi/golden_data/golden_summary_report_drought_spi_9m_polygon_svobs.csv new file mode 100644 index 0000000000..7df929c194 --- /dev/null +++ b/scripts/noaa/gpcc_spi/golden_data/golden_summary_report_drought_spi_9m_polygon_svobs.csv @@ -0,0 +1,3 @@ +"StatVar","ScalingFactors","observationPeriods","NumPlaces","Units","MinDate","MeasurementMethods" +"Area_DroughtEvent","[]","[]","23907","[SquareKilometer]","2010-12","[dcAggregate/PearsonDistribution]" +"standardizedPrecipitationIndex","[]","[]","23907","[]","2010-12","[dcAggregate/PearsonDistribution]" diff --git a/scripts/noaa/gpcc_spi/golden_data/golden_summary_report_gpcc_spi.csv b/scripts/noaa/gpcc_spi/golden_data/golden_summary_report_gpcc_spi.csv new file mode 100644 index 0000000000..75cf63c01b --- /dev/null +++ b/scripts/noaa/gpcc_spi/golden_data/golden_summary_report_gpcc_spi.csv @@ -0,0 +1,7 @@ +"StatVar","observationPeriods","MeasurementMethods","MinDate","ScalingFactors","NumPlaces","Units" +"StandardizedPrecipitationIndex_Atmosphere_36MonthPeriod","[P36M]","[PearsonDistribution]","2010-12","[]","18967","[]" +"StandardizedPrecipitationIndex_Atmosphere_1MonthPeriod","[P1M]","[PearsonDistribution]","2010-12","[]","18967","[]" +"StandardizedPrecipitationIndex_Atmosphere_3MonthPeriod","[P3M]","[PearsonDistribution]","2010-12","[]","18967","[]" +"StandardizedPrecipitationIndex_Atmosphere_6MonthPeriod","[P6M]","[PearsonDistribution]","2010-12","[]","18967","[]" +"StandardizedPrecipitationIndex_Atmosphere_72MonthPeriod","[P72M]","[PearsonDistribution]","2010-12","[]","18967","[]" +"StandardizedPrecipitationIndex_Atmosphere_9MonthPeriod","[P9M]","[PearsonDistribution]","2010-12","[]","18967","[]" diff --git a/scripts/noaa/gpcc_spi/golden_data/golden_summary_report_gpcc_spi_aggregation.csv b/scripts/noaa/gpcc_spi/golden_data/golden_summary_report_gpcc_spi_aggregation.csv new file mode 100644 index 0000000000..c01907bf53 --- /dev/null +++ b/scripts/noaa/gpcc_spi/golden_data/golden_summary_report_gpcc_spi_aggregation.csv @@ -0,0 +1,7 @@ +"StatVar","MinDate","MeasurementMethods","NumPlaces","Units","ScalingFactors","observationPeriods" +"StandardizedPrecipitationIndex_Atmosphere_36MonthPeriod","2010-12","[dcAggregate/GridWeightedPearson]","5392","[]","[]","[P36M]" +"StandardizedPrecipitationIndex_Atmosphere_1MonthPeriod","2010-12","[dcAggregate/GridWeightedPearson]","5392","[]","[]","[P1M]" +"StandardizedPrecipitationIndex_Atmosphere_3MonthPeriod","2010-12","[dcAggregate/GridWeightedPearson]","5392","[]","[]","[P3M]" +"StandardizedPrecipitationIndex_Atmosphere_6MonthPeriod","2010-12","[dcAggregate/GridWeightedPearson]","5392","[]","[]","[P6M]" +"StandardizedPrecipitationIndex_Atmosphere_72MonthPeriod","2010-12","[dcAggregate/GridWeightedPearson]","5392","[]","[]","[P72M]" +"StandardizedPrecipitationIndex_Atmosphere_9MonthPeriod","2010-12","[dcAggregate/GridWeightedPearson]","5392","[]","[]","[P9M]" diff --git a/scripts/noaa/gpcc_spi/manifest.json b/scripts/noaa/gpcc_spi/manifest.json index 77923a6058..aaf1036f74 100644 --- a/scripts/noaa/gpcc_spi/manifest.json +++ b/scripts/noaa/gpcc_spi/manifest.json @@ -35,7 +35,13 @@ "cleaned_csv": "output_files/events_spi_9m_polygon/event_svobs/drought_spi_9m_polygon_svobs.csv" } ], - "cron_schedule": "0 9 1,15 * *" + "cron_schedule": "0 9 1,15 * *", + "validation_config_file": "validation_config.json", + "resource_limits": { + "cpu": 64, + "memory": 256, + "disk": 4096 + } } ] } \ No newline at end of file diff --git a/scripts/noaa/gpcc_spi/validation_config.json b/scripts/noaa/gpcc_spi/validation_config.json new file mode 100644 index 0000000000..32780a0e4e --- /dev/null +++ b/scripts/noaa/gpcc_spi/validation_config.json @@ -0,0 +1,56 @@ +{ + "schema_version": "1.0", + "rules": [ + { + "rule_id": "check_deleted_records_percent", + "description": "Checks that the percentage of deleted records for the entire import is within threshold.", + "validator": "DELETED_RECORDS_PERCENT", + "params": { "threshold": 0.1} + }, + { + "rule_id": "check_goldens_summary_gpcc_spi", + "description": "Validates gpcc_spi data against its golden summary report.", + "validator": "GOLDENS_CHECK", + "params": { + "golden_files": "../../../../golden_data/golden_summary_report_gpcc_spi.csv", + "input_files": "../../input0/genmcf/summary_report.csv" + } + }, + { + "rule_id": "check_goldens_summary_gpcc_spi_aggregation", + "description": "Validates gpcc_spi_aggregation data against its golden summary report.", + "validator": "GOLDENS_CHECK", + "params": { + "golden_files": "../../../../golden_data/golden_summary_report_gpcc_spi_aggregation.csv", + "input_files": "../../input1/genmcf/summary_report.csv" + } + }, + { + "rule_id": "check_goldens_summary_drought_spi_9m_polygon_place_svobs", + "description": "Validates drought_spi_9m_polygon_place_svobs data against its golden summary report.", + "validator": "GOLDENS_CHECK", + "params": { + "golden_files": "../../../../golden_data/golden_summary_report_drought_spi_9m_polygon_place_svobs.csv", + "input_files": "../../input2/genmcf/summary_report.csv" + } + }, + { + "rule_id": "check_goldens_summary_drought_spi_9m_polygon_svobs", + "description": "Validates drought_spi_9m_polygon_svobs data against its golden summary report.", + "validator": "GOLDENS_CHECK", + "params": { + "golden_files": "../../../../golden_data/golden_summary_report_drought_spi_9m_polygon_svobs.csv", + "input_files": "../../input4/genmcf/summary_report.csv" + } + }, + { + "rule_id": "check_goldens_output_csv_gpcc_spi_aggregation", + "description": "Verifies the generated gpcc_spi_aggregation output CSV data matches established critical golden records", + "validator": "GOLDENS_CHECK", + "params": { + "golden_files": "../../../../golden_data/golden_observations_gpcc_spi_aggregation.csv", + "input_files": "../../../../output_files/events_spi_9m_polygon/event_svobs/drought_spi_9m_polygon_svobs.csv" + } + } + ] +} \ No newline at end of file From eec13d3ed3026b7b0bc1f988aef08e8c1c5cec79 Mon Sep 17 00:00:00 2001 From: Tarun Bali Date: Mon, 20 Jul 2026 10:37:58 +0000 Subject: [PATCH 8/9] adding goldens for NOAA GPCC --- scripts/noaa/gpcc_spi/validation_config.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/noaa/gpcc_spi/validation_config.json b/scripts/noaa/gpcc_spi/validation_config.json index 32780a0e4e..f097afa89c 100644 --- a/scripts/noaa/gpcc_spi/validation_config.json +++ b/scripts/noaa/gpcc_spi/validation_config.json @@ -53,4 +53,4 @@ } } ] -} \ No newline at end of file +} From 96f803c7f5c1844e2cf0958a4f6d2c0bbae33199 Mon Sep 17 00:00:00 2001 From: Tarun Bali Date: Mon, 20 Jul 2026 10:46:35 +0000 Subject: [PATCH 9/9] adding goldens for NOAA GPCC --- scripts/noaa/gpcc_spi/validation_config.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/noaa/gpcc_spi/validation_config.json b/scripts/noaa/gpcc_spi/validation_config.json index f097afa89c..232ac6a8c6 100644 --- a/scripts/noaa/gpcc_spi/validation_config.json +++ b/scripts/noaa/gpcc_spi/validation_config.json @@ -49,7 +49,7 @@ "validator": "GOLDENS_CHECK", "params": { "golden_files": "../../../../golden_data/golden_observations_gpcc_spi_aggregation.csv", - "input_files": "../../../../output_files/events_spi_9m_polygon/event_svobs/drought_spi_9m_polygon_svobs.csv" + "input_files": "../../../../output_files/aggregations/*.csv" } } ]