AFT issue: I keep getting permissions requests to read from ~/.local/share/cortexki

[TheAllSeeingPie]

Description

I keep getting permissions requests to read from ~/.local/share/cortexkit/aft/opencode/bash-tasks/221e756a35cbe6bb/* which is outside of the workspace my agents are in. I have a very autonomous workflow and so it means that unattended processes can end up getting halted for a while. I don't think it should be trying to read from that area directly and it seems like it should be wrapped in a tool call?

Environment

• AFT CLI: v0.46.0
• AFT binary: 0.46.0
• OS: darwin arm64
• Node: v22.22.2

Diagnostics

• Timestamp: 2026-07-15T06:55:23.495Z
• AFT CLI: v0.46.0
• AFT binary: 0.46.0
• OS: darwin arm64
• Node: v22.22.2

OpenCode

• Host installed: true
• Host version: 1.17.20
• Plugin registered: true
• Plugin version: 0.46.0
• AFT enabled: true
• AFT config parse error: none

Config paths

{
  "configDir": "~/.config/opencode",
  "harnessConfig": "~/.config/opencode/opencode.json",
  "harnessConfigFormat": "json",
  "aftConfig": "~/.config/cortexkit/aft.jsonc",
  "aftConfigFormat": "jsonc",
  "tuiConfig": "~/.config/opencode/tui.json",
  "tuiConfigFormat": "json"
}

AFT flags

{
  "validate_on_edit": "full",
  "tool_surface": "full",
  "search_index": true,
  "semantic_search": true,
  "format_on_edit": true,
  "bash": {
    "rewrite": true,
    "compress": true,
    "background": false,
    "subagent_background": false,
    "foreground_wait_window_ms": 8000
  }
}

Plugin cache

{
  "path": "~/.cache/opencode/packages/@cortexkit/aft-opencode@latest",
  "cached": "0.46.0",
  "latest": "0.46.0",
  "exists": true
}

Storage

{
  "path": "~/.local/share/cortexkit/aft",
  "exists": true,
  "accessible": true,
  "sizesByKey": {
    "index": 98013365,
    "semantic": 392686721,
    "backups": 0,
    "url_cache": 188727,
    "onnxruntime": 70837420
  }
}

ONNX Runtime

{
  "required": true,
  "systemPath": null,
  "systemVersion": null,
  "systemCompatible": null,
  "cachedPath": "~/.local/share/cortexkit/aft/onnxruntime/1.24.4",
  "cachedVersion": "1.24.4",
  "cachedCompatible": true,
  "platform": "darwin-arm64",
  "installHint": "brew install onnxruntime (Apple Silicon)",
  "requirement": ">=1.20"
}

Log file

/var/folders/h8/jyfc241d0xqb57fw4f0jp0s80000gn/T/aft-plugin.log (98 KB)

Binary cache

{
  "versions": [
    "v0.38.0",
    "v0.39.0",
    "v0.39.1",
    "v0.39.2",
    "v0.39.4",
    "v0.41.0",
    "v0.42.0",
    "v0.46.0"
  ],
  "activeVersion": "v0.46.0",
  "totalSize": 502247472,
  "path": "~/.cache/aft/bin"
}

LSP cache

{
  "npm": {
    "path": "~/.cache/aft/lsp-packages",
    "entries": [
      {
        "name": "@biomejs/biome",
        "path": "~/.cache/aft/lsp-packages/%40biomejs%2Fbiome",
        "size": 56448878
      },
      {
        "name": ".quarantine",
        "path": "~/.cache/aft/lsp-packages/.quarantine",
        "size": 55735101
      },
      {
        "name": "pyright",
        "path": "~/.cache/aft/lsp-packages/pyright",
        "size": 19459975
      },
      {
        "name": "yaml-language-server",
        "path": "~/.cache/aft/lsp-packages/yaml-language-server",
        "size": 18337337
      },
      {
        "name": "bash-language-server",
        "path": "~/.cache/aft/lsp-packages/bash-language-server",
        "size": 14513542
      },
      {
        "name": "typescript-language-server",
        "path": "~/.cache/aft/lsp-packages/typescript-language-server",
        "size": 3226474
      },
      {
        "name": "dockerfile-language-server-nodejs",
        "path": "~/.cache/aft/lsp-packages/dockerfile-language-server-nodejs",
        "size": 2464588
      },
      {
        "name": "LuaLS/lua-language-server",
        "path": "~/.cache/aft/lsp-packages/LuaLS%2Flua-language-server",
        "size": 79
      },
      {
        "name": "clangd/clangd",
        "path": "~/.cache/aft/lsp-packages/clangd%2Fclangd",
        "size": 79
      }
    ],
    "totalSize": 170186053
  },
  "github": {
    "path": "~/.cache/aft/lsp-binaries",
    "entries": [
      {
        "name": "clangd",
        "path": "~/.cache/aft/lsp-binaries/clangd",
        "size": 556094791
      },
      {
        "name": "lua-ls",
        "path": "~/.cache/aft/lsp-binaries/lua-ls",
        "size": 19189185
      }
    ],
    "totalSize": 575283976
  },
  "totalSize": 745470029
}

Recent errors (last 20, sanitized)

No error-shaped log lines found in recent history.

Recent AFT tool failures

No recent AFT tool failures recorded.

Logs (last 200 lines per harness)

OpenCode log (/var/folders/h8/jyfc241d0xqb57fw4f0jp0s80000gn/T/aft-plugin.log)

[2026-07-15T06:21:48.383Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] released filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/594c92201643e546/.locks/8ebce934213680e9.lock
[2026-07-15T06:21:48.394Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=apply_patch total=77ms pre=0ms bridge=77ms post=0ms
[2026-07-15T06:21:49.003Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] invalidated 2 files
[2026-07-15T06:21:49.003Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=read total=389ms pre=1ms bridge=389ms post=0ms
[2026-07-15T06:21:58.666Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=read total=2ms pre=1ms bridge=1ms post=0ms
[2026-07-15T06:22:10.350Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] acquired filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/594c92201643e546/.locks/5a32738a6db21429.lock
[2026-07-15T06:22:10.368Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] released filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/594c92201643e546/.locks/5a32738a6db21429.lock
[2026-07-15T06:22:10.381Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] acquired filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/594c92201643e546/.locks/5955d91c4c8e6b48.lock
[2026-07-15T06:22:10.398Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] released filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/594c92201643e546/.locks/5955d91c4c8e6b48.lock
[2026-07-15T06:22:10.418Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] acquired filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/594c92201643e546/.locks/8ebce934213680e9.lock
[2026-07-15T06:22:10.436Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] released filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/594c92201643e546/.locks/8ebce934213680e9.lock
[2026-07-15T06:22:10.447Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=apply_patch total=116ms pre=0ms bridge=116ms post=0ms
[2026-07-15T06:22:11.107Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] invalidated 3 files
[2026-07-15T06:22:15.937Z] INFO [aft-plugin] [aft] [ses_09b95227bffew3phws5srZSA5O] acquired filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/1f36cc292c367696/.locks/f93f0dc1e28a802c.lock
[2026-07-15T06:22:15.957Z] INFO [aft-plugin] [aft] [ses_09b95227bffew3phws5srZSA5O] released filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/1f36cc292c367696/.locks/f93f0dc1e28a802c.lock
[2026-07-15T06:22:16.236Z] INFO [aft-plugin] [aft] [ses_09b95227bffew3phws5srZSA5O] format: <PROJECT>/packages/opencode-plugin/src/feature-factory-prompt-contracts.test.ts (<PROJECT>/node_modules/.bin/prettier)
[2026-07-15T06:22:19.309Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=apply_patch total=3389ms pre=0ms bridge=3389ms post=0ms
[2026-07-15T06:22:19.768Z] INFO [aft-plugin] [aft] [ses_09b95227bffew3phws5srZSA5O] invalidated 1 files
[2026-07-15T06:22:20.036Z] INFO [aft-plugin] [aft] [ses_09d31a3bcffeMBTYvtDubKuV3j] semantic collect: 9 chunks from 1 files in 12 ms
[2026-07-15T06:22:20.036Z] INFO [aft-plugin] [aft] [ses_09d31a3bcffeMBTYvtDubKuV3j] semantic refresh: 1 changed, 0 new, 0 deleted, 1 total processed
[2026-07-15T06:22:22.359Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=17ms pre=0ms bridge=17ms post=0ms
[2026-07-15T06:22:22.362Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=13ms pre=0ms bridge=13ms post=0ms
[2026-07-15T06:22:22.399Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=2ms pre=0ms bridge=2ms post=0ms
[2026-07-15T06:22:22.470Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=13ms pre=1ms bridge=12ms post=0ms
[2026-07-15T06:22:22.470Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=bash total=141ms pre=0ms bridge=140ms post=0ms
[2026-07-15T06:22:22.908Z] INFO [aft-plugin] [aft] perf tier2 phases category=duplicates freshness=11ms snapshot=0ms scan=22ms(5 files) db=42ms rollup=120ms
[2026-07-15T06:22:22.908Z] INFO [aft-plugin] [aft] perf tier2 category=duplicates reuse=miss ms=327
[2026-07-15T06:22:22.981Z] INFO [aft-plugin] [aft] perf tier2 phases category=cycles freshness=3ms snapshot=0ms scan=136ms(5 files) db=75ms rollup=83ms
[2026-07-15T06:22:22.981Z] INFO [aft-plugin] [aft] perf tier2 category=cycles reuse=miss ms=400
[2026-07-15T06:22:23.209Z] INFO [aft-plugin] [aft] tier2 dead_code: refreshed callgraph store at ~/.local/share/cortexkit/aft/opencode/callgraph for 5 watcher path(s): changed=5 deleted=0 refreshed_own=0
[2026-07-15T06:22:23.434Z] INFO [aft-plugin] [aft] perf tier2 phases category=unused_exports freshness=9ms snapshot=0ms scan=286ms(5 files) db=77ms rollup=366ms
[2026-07-15T06:22:23.434Z] INFO [aft-plugin] [aft] perf tier2 category=unused_exports reuse=miss ms=853
[2026-07-15T06:22:23.440Z] INFO [aft-plugin] [aft] perf tier2_callgraph_snapshot: source=callgraph_store files=889 exports=1810 edges=47423 entry_points=143 ms=752
[2026-07-15T06:22:24.576Z] INFO [aft-plugin] [aft] perf tier2 phases category=dead_code freshness=6ms snapshot=752ms scan=522ms(5 files) db=46ms rollup=556ms
[2026-07-15T06:22:24.578Z] INFO [aft-plugin] [aft] perf tier2 category=dead_code reuse=miss ms=1997
[2026-07-15T06:22:24.827Z] INFO [aft-plugin] [aft] perf tier2_callgraph_snapshot: source=callgraph_store files=889 exports=1810 edges=47423 entry_points=143 ms=222
[2026-07-15T06:22:25.403Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_inspect total=2915ms pre=2ms bridge=2913ms post=0ms
[2026-07-15T06:22:27.485Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=bash total=2889ms pre=0ms bridge=2888ms post=0ms
[2026-07-15T06:22:31.680Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=read total=2ms pre=1ms bridge=1ms post=0ms
[2026-07-15T06:22:31.698Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=read total=3ms pre=2ms bridge=1ms post=0ms
[2026-07-15T06:22:31.721Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=9ms pre=0ms bridge=8ms post=0ms
[2026-07-15T06:22:31.729Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=11ms pre=1ms bridge=9ms post=0ms
[2026-07-15T06:22:31.746Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=12ms pre=0ms bridge=12ms post=0ms
[2026-07-15T06:22:32.036Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=read total=2ms pre=1ms bridge=1ms post=0ms
[2026-07-15T06:22:40.752Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=read total=3ms pre=2ms bridge=1ms post=0ms
[2026-07-15T06:22:40.785Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=read total=12ms pre=3ms bridge=9ms post=0ms
[2026-07-15T06:22:40.785Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=read total=6ms pre=1ms bridge=5ms post=0ms
[2026-07-15T06:22:40.793Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=read total=9ms pre=1ms bridge=8ms post=0ms
[2026-07-15T06:22:40.816Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=16ms pre=0ms bridge=16ms post=0ms
[2026-07-15T06:22:41.042Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=grep total=2ms pre=1ms bridge=1ms post=0ms
[2026-07-15T06:22:45.196Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=read total=2ms pre=1ms bridge=1ms post=0ms
[2026-07-15T06:22:50.729Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=grep total=9ms pre=1ms bridge=8ms post=0ms
[2026-07-15T06:22:53.750Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=apply_patch total=2ms pre=0ms bridge=2ms post=0ms
[2026-07-15T06:22:58.042Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=9ms pre=0ms bridge=9ms post=0ms
[2026-07-15T06:22:58.226Z] INFO [aft-plugin] [aft] [ses_09b95227bffew3phws5srZSA5O] acquired filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/1f36cc292c367696/.locks/f93f0dc1e28a802c.lock
[2026-07-15T06:22:58.240Z] INFO [aft-plugin] [aft] [ses_09b95227bffew3phws5srZSA5O] released filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/1f36cc292c367696/.locks/f93f0dc1e28a802c.lock
[2026-07-15T06:22:58.523Z] INFO [aft-plugin] [aft] [ses_09b95227bffew3phws5srZSA5O] format: <PROJECT>/packages/opencode-plugin/src/feature-factory-prompt-contracts.test.ts (<PROJECT>/node_modules/.bin/prettier)
[2026-07-15T06:23:01.757Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=apply_patch total=3557ms pre=0ms bridge=3557ms post=0ms
[2026-07-15T06:23:02.234Z] INFO [aft-plugin] [aft] [ses_09b95227bffew3phws5srZSA5O] invalidated 1 files
[2026-07-15T06:23:02.503Z] INFO [aft-plugin] [aft] [ses_09d31a3bcffeMBTYvtDubKuV3j] semantic collect: 9 chunks from 1 files in 12 ms
[2026-07-15T06:23:02.503Z] INFO [aft-plugin] [aft] [ses_09d31a3bcffeMBTYvtDubKuV3j] semantic refresh: 1 changed, 0 new, 0 deleted, 1 total processed
[2026-07-15T06:23:02.738Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] acquired filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/594c92201643e546/.locks/8ebce934213680e9.lock
[2026-07-15T06:23:02.756Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] released filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/594c92201643e546/.locks/8ebce934213680e9.lock
[2026-07-15T06:23:02.766Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=apply_patch total=52ms pre=0ms bridge=52ms post=0ms
[2026-07-15T06:23:03.396Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] invalidated 1 files
[2026-07-15T06:23:10.231Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=bash total=2009ms pre=0ms bridge=2009ms post=0ms
[2026-07-15T06:23:20.804Z] INFO [aft-plugin] [aft] perf tier2 phases category=duplicates freshness=11ms snapshot=0ms scan=20ms(2 files) db=43ms rollup=130ms
[2026-07-15T06:23:20.805Z] INFO [aft-plugin] [aft] perf tier2 category=duplicates reuse=miss ms=342
[2026-07-15T06:23:20.877Z] INFO [aft-plugin] [aft] perf tier2 phases category=cycles freshness=14ms snapshot=0ms scan=136ms(2 files) db=74ms rollup=83ms
[2026-07-15T06:23:20.877Z] INFO [aft-plugin] [aft] perf tier2 category=cycles reuse=miss ms=415
[2026-07-15T06:23:21.133Z] INFO [aft-plugin] [aft] tier2 dead_code: refreshed callgraph store at ~/.local/share/cortexkit/aft/opencode/callgraph for 2 watcher path(s): changed=2 deleted=0 refreshed_own=0
[2026-07-15T06:23:21.337Z] INFO [aft-plugin] [aft] perf tier2 phases category=unused_exports freshness=13ms snapshot=0ms scan=293ms(2 files) db=69ms rollup=379ms
[2026-07-15T06:23:21.337Z] INFO [aft-plugin] [aft] perf tier2 category=unused_exports reuse=miss ms=875
[2026-07-15T06:23:21.378Z] INFO [aft-plugin] [aft] perf tier2_callgraph_snapshot: source=callgraph_store files=889 exports=1810 edges=47423 entry_points=143 ms=792
[2026-07-15T06:23:22.533Z] INFO [aft-plugin] [aft] perf tier2 phases category=dead_code freshness=16ms snapshot=792ms scan=536ms(2 files) db=48ms rollup=557ms
[2026-07-15T06:23:22.535Z] INFO [aft-plugin] [aft] perf tier2 category=dead_code reuse=miss ms=2072
[2026-07-15T06:23:22.818Z] INFO [aft-plugin] [aft] perf tier2_callgraph_snapshot: source=callgraph_store files=889 exports=1810 edges=47423 entry_points=143 ms=251
[2026-07-15T06:23:23.436Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_inspect total=3083ms pre=3ms bridge=3080ms post=0ms
[2026-07-15T06:23:23.598Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=bash total=3265ms pre=0ms bridge=3264ms post=0ms
[2026-07-15T06:23:23.721Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=bash total=3374ms pre=0ms bridge=3374ms post=0ms
[2026-07-15T06:23:23.847Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=bash total=3504ms pre=0ms bridge=3504ms post=0ms
[2026-07-15T06:23:24.170Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=bash total=3831ms pre=0ms bridge=3831ms post=0ms
[2026-07-15T06:23:37.045Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=apply_patch total=1ms pre=0ms bridge=1ms post=0ms
[2026-07-15T06:23:41.061Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=11ms pre=0ms bridge=11ms post=0ms
[2026-07-15T06:23:47.799Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] acquired filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/594c92201643e546/.locks/8ebce934213680e9.lock
[2026-07-15T06:23:47.820Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] released filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/594c92201643e546/.locks/8ebce934213680e9.lock
[2026-07-15T06:23:47.831Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=apply_patch total=49ms pre=0ms bridge=48ms post=0ms
[2026-07-15T06:23:48.672Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] invalidated 1 files
[2026-07-15T06:24:00.778Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=17ms pre=1ms bridge=16ms post=0ms
[2026-07-15T06:24:00.778Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=13ms pre=1ms bridge=12ms post=0ms
[2026-07-15T06:24:00.787Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=18ms pre=1ms bridge=17ms post=0ms
[2026-07-15T06:24:01.072Z] INFO [aft-plugin] [aft] perf tier2 phases category=duplicates freshness=5ms snapshot=0ms scan=0ms(1 files) db=43ms rollup=51ms
[2026-07-15T06:24:01.072Z] INFO [aft-plugin] [aft] perf tier2 category=duplicates reuse=miss ms=235
[2026-07-15T06:24:01.197Z] INFO [aft-plugin] [aft] perf tier2 phases category=cycles freshness=4ms snapshot=0ms scan=144ms(1 files) db=77ms rollup=0ms
[2026-07-15T06:24:01.197Z] INFO [aft-plugin] [aft] perf tier2 category=cycles reuse=miss ms=360
[2026-07-15T06:24:01.492Z] INFO [aft-plugin] [aft] tier2 dead_code: refreshed callgraph store at ~/.local/share/cortexkit/aft/opencode/callgraph for 1 watcher path(s): changed=1 deleted=0 refreshed_own=0
[2026-07-15T06:24:01.680Z] INFO [aft-plugin] [aft] perf tier2 phases category=unused_exports freshness=4ms snapshot=0ms scan=293ms(1 files) db=72ms rollup=355ms
[2026-07-15T06:24:01.680Z] INFO [aft-plugin] [aft] perf tier2 category=unused_exports reuse=miss ms=844
[2026-07-15T06:24:01.728Z] INFO [aft-plugin] [aft] perf tier2_callgraph_snapshot: source=callgraph_store files=889 exports=1810 edges=47423 entry_points=143 ms=782
[2026-07-15T06:24:02.783Z] INFO [aft-plugin] [aft] perf tier2 phases category=dead_code freshness=3ms snapshot=782ms scan=453ms(1 files) db=45ms rollup=544ms
[2026-07-15T06:24:02.786Z] INFO [aft-plugin] [aft] perf tier2 category=dead_code reuse=miss ms=1949
[2026-07-15T06:24:03.041Z] INFO [aft-plugin] [aft] perf tier2_callgraph_snapshot: source=callgraph_store files=889 exports=1810 edges=47423 entry_points=143 ms=228
[2026-07-15T06:24:03.630Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_inspect total=2856ms pre=3ms bridge=2853ms post=0ms
[2026-07-15T06:24:03.668Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=bash total=3017ms pre=0ms bridge=3017ms post=0ms
[2026-07-15T06:24:04.663Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=bash total=3906ms pre=0ms bridge=3906ms post=0ms
[2026-07-15T06:24:11.352Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=bash total=464ms pre=0ms bridge=464ms post=0ms
[2026-07-15T06:24:21.052Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] acquired filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/594c92201643e546/.locks/a548b6fc49a1cfea.lock
[2026-07-15T06:24:21.073Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] released filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/594c92201643e546/.locks/a548b6fc49a1cfea.lock
[2026-07-15T06:24:21.080Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] acquired filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/594c92201643e546/.locks/f2f38a202d79725b.lock
[2026-07-15T06:24:21.097Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] released filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/594c92201643e546/.locks/f2f38a202d79725b.lock
[2026-07-15T06:24:21.099Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=apply_patch total=59ms pre=0ms bridge=59ms post=0ms
[2026-07-15T06:24:21.765Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] invalidated 1 files
[2026-07-15T06:24:33.752Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=5ms pre=2ms bridge=3ms post=0ms
[2026-07-15T06:24:33.762Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=11ms pre=0ms bridge=11ms post=0ms
[2026-07-15T06:24:34.121Z] INFO [aft-plugin] [aft] perf tier2 phases category=duplicates freshness=12ms snapshot=0ms scan=0ms(1 files) db=52ms rollup=60ms
[2026-07-15T06:24:34.121Z] INFO [aft-plugin] [aft] perf tier2 category=duplicates reuse=miss ms=273
[2026-07-15T06:24:34.223Z] INFO [aft-plugin] [aft] perf tier2 phases category=cycles freshness=13ms snapshot=0ms scan=154ms(1 files) db=85ms rollup=0ms
[2026-07-15T06:24:34.223Z] INFO [aft-plugin] [aft] perf tier2 category=cycles reuse=miss ms=375
[2026-07-15T06:24:34.584Z] INFO [aft-plugin] [aft] tier2 dead_code: refreshed callgraph store at ~/.local/share/cortexkit/aft/opencode/callgraph for 2 watcher path(s): changed=2 deleted=0 refreshed_own=1
[2026-07-15T06:24:34.754Z] INFO [aft-plugin] [aft] perf tier2 phases category=unused_exports freshness=7ms snapshot=0ms scan=330ms(1 files) db=76ms rollup=366ms
[2026-07-15T06:24:34.754Z] INFO [aft-plugin] [aft] perf tier2 category=unused_exports reuse=miss ms=906
[2026-07-15T06:24:34.836Z] INFO [aft-plugin] [aft] perf tier2_callgraph_snapshot: source=callgraph_store files=889 exports=1810 edges=47423 entry_points=143 ms=866
[2026-07-15T06:24:35.916Z] INFO [aft-plugin] [aft] perf tier2 phases category=dead_code freshness=10ms snapshot=866ms scan=447ms(1 files) db=54ms rollup=563ms
[2026-07-15T06:24:35.918Z] INFO [aft-plugin] [aft] perf tier2 category=dead_code reuse=miss ms=2070
[2026-07-15T06:24:36.157Z] INFO [aft-plugin] [aft] perf tier2_callgraph_snapshot: source=callgraph_store files=889 exports=1810 edges=47423 entry_points=143 ms=212
[2026-07-15T06:24:36.724Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_inspect total=2955ms pre=5ms bridge=2950ms post=0ms
[2026-07-15T06:24:36.796Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=bash total=3134ms pre=0ms bridge=3134ms post=0ms
[2026-07-15T06:24:36.796Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=bash total=3103ms pre=0ms bridge=3102ms post=0ms
[2026-07-15T06:24:36.796Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=bash total=3078ms pre=0ms bridge=3078ms post=0ms
[2026-07-15T06:24:52.880Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=bash total=140ms pre=0ms bridge=139ms post=0ms
[2026-07-15T06:24:53.716Z] INFO [aft-plugin] [aft] [ses_09b952299ffeCa9In7S0qf4cWQ] invalidated 1 files
[2026-07-15T06:25:10.125Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=bash total=1099ms pre=0ms bridge=1099ms post=0ms
[2026-07-15T06:25:11.327Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=9ms pre=1ms bridge=8ms post=0ms
[2026-07-15T06:25:11.797Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=7ms pre=0ms bridge=7ms post=0ms
[2026-07-15T06:25:11.942Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_search total=12ms pre=0ms bridge=12ms post=0ms
[2026-07-15T06:25:12.312Z] INFO [aft-plugin] [aft] perf tier2 phases category=duplicates freshness=7ms snapshot=0ms scan=0ms(1 files) db=41ms rollup=50ms
[2026-07-15T06:25:12.313Z] INFO [aft-plugin] [aft] perf tier2 category=duplicates reuse=miss ms=216
[2026-07-15T06:25:12.413Z] INFO [aft-plugin] [aft] perf tier2 phases category=cycles freshness=3ms snapshot=0ms scan=123ms(1 files) db=73ms rollup=0ms
[2026-07-15T06:25:12.413Z] INFO [aft-plugin] [aft] perf tier2 category=cycles reuse=miss ms=318
[2026-07-15T06:25:12.701Z] INFO [aft-plugin] [aft] tier2 dead_code: refreshed callgraph store at ~/.local/share/cortexkit/aft/opencode/callgraph for 1 watcher path(s): changed=1 deleted=0 refreshed_own=0
[2026-07-15T06:25:12.860Z] INFO [aft-plugin] [aft] perf tier2 phases category=unused_exports freshness=11ms snapshot=0ms scan=265ms(1 files) db=61ms rollup=323ms
[2026-07-15T06:25:12.861Z] INFO [aft-plugin] [aft] perf tier2 category=unused_exports reuse=miss ms=765
[2026-07-15T06:25:12.935Z] INFO [aft-plugin] [aft] perf tier2_callgraph_snapshot: source=callgraph_store files=889 exports=1810 edges=47423 entry_points=143 ms=739
[2026-07-15T06:25:13.980Z] INFO [aft-plugin] [aft] perf tier2 phases category=dead_code freshness=9ms snapshot=739ms scan=415ms(1 files) db=43ms rollup=574ms
[2026-07-15T06:25:13.982Z] INFO [aft-plugin] [aft] perf tier2 category=dead_code reuse=miss ms=1887
[2026-07-15T06:25:14.248Z] INFO [aft-plugin] [aft] perf tier2_callgraph_snapshot: source=callgraph_store files=889 exports=1810 edges=47423 entry_points=143 ms=235
[2026-07-15T06:25:14.870Z] INFO [aft-plugin] [ses_09b952299ffeCa9In7S0qf4cWQ] perf tool=aft_inspect total=2834ms pre=4ms bridge=2830ms post=0ms
[2026-07-15T06:25:39.685Z] INFO [aft-plugin] [aft] [ses_0a56a4865ffe0H0oKViwy10Url] tier2 refresh scheduled: reason=debounce, categories=["dead_code", "unused_exports", "duplicates", "cycles"]
[2026-07-15T06:49:54.409Z] INFO [aft-plugin] [ses_09b9522bfffebpIfEKUYoHFdWy] perf tool=grep total=1749631ms pre=1749625ms bridge=6ms post=0ms
[2026-07-15T06:50:01.155Z] INFO [aft-plugin] [ses_09b9522bfffebpIfEKUYoHFdWy] perf tool=grep total=14ms pre=7ms bridge=7ms post=0ms
[2026-07-15T06:50:01.226Z] INFO [aft-plugin] [ses_09b9522bfffebpIfEKUYoHFdWy] perf tool=read total=2ms pre=2ms bridge=1ms post=0ms
[2026-07-15T06:50:45.083Z] INFO [aft-plugin] [aft] [ses_09b9522bfffebpIfEKUYoHFdWy] acquired filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/221e756a35cbe6bb/.locks/dd283f30faf4ab6b.lock
[2026-07-15T06:50:45.102Z] INFO [aft-plugin] [aft] [ses_09b9522bfffebpIfEKUYoHFdWy] released filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/221e756a35cbe6bb/.locks/dd283f30faf4ab6b.lock
[2026-07-15T06:50:45.120Z] INFO [aft-plugin] [aft] [ses_09b9522bfffebpIfEKUYoHFdWy] acquired filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/221e756a35cbe6bb/.locks/88fab05ea6e9fd97.lock
[2026-07-15T06:50:45.139Z] INFO [aft-plugin] [aft] [ses_09b9522bfffebpIfEKUYoHFdWy] released filesystem lock at ~/.local/share/cortexkit/aft/opencode/backups/221e756a35cbe6bb/.locks/88fab05ea6e9fd97.lock
[2026-07-15T06:50:45.142Z] INFO [aft-plugin] [ses_09b9522bfffebpIfEKUYoHFdWy] perf tool=apply_patch total=86ms pre=0ms bridge=86ms post=0ms
[2026-07-15T06:50:51.928Z] INFO [aft-plugin] [aft] [ses_09b9522bfffebpIfEKUYoHFdWy] invalidated 2 files
[2026-07-15T06:50:54.208Z] INFO [aft-plugin] [ses_09b9522bfffebpIfEKUYoHFdWy] perf tool=bash total=3276ms pre=0ms bridge=3275ms post=0ms
[2026-07-15T06:51:01.433Z] INFO [aft-plugin] [ses_09b9522bfffebpIfEKUYoHFdWy] perf tool=read total=9ms pre=1ms bridge=8ms post=0ms
[2026-07-15T06:51:01.581Z] INFO [aft-plugin] [ses_09b9522bfffebpIfEKUYoHFdWy] perf tool=read total=9ms pre=1ms bridge=8ms post=0ms
[2026-07-15T06:51:01.602Z] INFO [aft-plugin] [ses_09b9522bfffebpIfEKUYoHFdWy] perf tool=read total=22ms pre=1ms bridge=21ms post=0ms
[2026-07-15T06:51:01.800Z] INFO [aft-plugin] [ses_09b9522bfffebpIfEKUYoHFdWy] perf tool=bash total=126ms pre=0ms bridge=126ms post=0ms
[2026-07-15T06:51:28.054Z] INFO [aft-plugin] [ses_09b9522bfffebpIfEKUYoHFdWy] perf tool=glob total=6ms pre=1ms bridge=5ms post=0ms
[2026-07-15T06:51:28.129Z] INFO [aft-plugin] [ses_09b9522bfffebpIfEKUYoHFdWy] perf tool=grep total=25ms pre=3ms bridge=22ms post=0ms
[2026-07-15T06:51:28.269Z] INFO [aft-plugin] [ses_09b9522bfffebpIfEKUYoHFdWy] perf tool=bash total=158ms pre=0ms bridge=158ms post=0ms
[2026-07-15T06:51:28.378Z] INFO [aft-plugin] [ses_09b9522bfffebpIfEKUYoHFdWy] perf tool=bash total=250ms pre=0ms bridge=249ms post=0ms
[2026-07-15T06:51:36.203Z] INFO [aft-plugin] [ses_09b9522bfffebpIfEKUYoHFdWy] perf tool=bash total=2405ms pre=0ms bridge=2404ms post=0ms
[2026-07-15T06:51:36.962Z] INFO [aft-plugin] [aft] [ses_09b9522bfffebpIfEKUYoHFdWy] tier2 refresh scheduled: reason=debounce, categories=["dead_code", "unused_exports", "duplicates", "cycles"]
[2026-07-15T06:51:37.579Z] INFO [aft-plugin] [aft] tier2 dead_code: refreshed callgraph store at ~/.local/share/cortexkit/aft/opencode/callgraph for 2 watcher path(s): changed=2 deleted=0 refreshed_own=0
[2026-07-15T06:51:37.815Z] INFO [aft-plugin] [aft] perf tier2_callgraph_snapshot: source=callgraph_store files=889 exports=1810 edges=47423 entry_points=143 ms=669
[2026-07-15T06:51:39.341Z] INFO [aft-plugin] [aft] perf tier2 phases category=dead_code freshness=4ms snapshot=669ms scan=504ms(2 files) db=80ms rollup=920ms
[2026-07-15T06:51:39.343Z] INFO [aft-plugin] [aft] perf tier2 category=dead_code reuse=miss ms=2381
[2026-07-15T06:51:40.257Z] INFO [aft-plugin] [aft] perf tier2 phases category=unused_exports freshness=3ms snapshot=0ms scan=288ms(2 files) db=76ms rollup=414ms
[2026-07-15T06:51:40.257Z] INFO [aft-plugin] [aft] perf tier2 category=unused_exports reuse=miss ms=906
[2026-07-15T06:51:40.523Z] INFO [aft-plugin] [aft] perf tier2 phases category=duplicates freshness=3ms snapshot=0ms scan=0ms(2 files) db=41ms rollup=78ms
[2026-07-15T06:51:40.523Z] INFO [aft-plugin] [aft] perf tier2 category=duplicates reuse=miss ms=260
[2026-07-15T06:51:40.851Z] INFO [aft-plugin] [aft] perf tier2 phases category=cycles freshness=4ms snapshot=0ms scan=129ms(2 files) db=77ms rollup=0ms
[2026-07-15T06:51:40.851Z] INFO [aft-plugin] [aft] perf tier2 category=cycles reuse=miss ms=307
[2026-07-15T06:53:10.630Z] INFO [aft-plugin] [ses_09b734d9affe5pdAOJ7kOjpCkT] [subagent-detect] cache miss, calling client.session.get(id=ses_09b734d9affe5pdAOJ7kOjpCkT)
[2026-07-15T06:53:10.632Z] INFO [aft-plugin] [ses_09b734d9affe5pdAOJ7kOjpCkT] [subagent-detect] SDK returned session=present, parentID="ses_0a56a4865ffe0H0oKViwy10Url" → isSubagent=true
[2026-07-15T06:53:10.985Z] INFO [aft-plugin] [ses_09b734d9affe5pdAOJ7kOjpCkT] perf tool=bash total=355ms pre=3ms bridge=352ms post=0ms
[2026-07-15T06:53:11.864Z] INFO [aft-plugin] [aft] [ses_09b734d9affe5pdAOJ7kOjpCkT] invalidated 1 files
[2026-07-15T06:53:12.121Z] INFO [aft-plugin] [aft] [ses_09d31a3bcffeMBTYvtDubKuV3j] semantic collect: 2 chunks from 1 files in 4 ms
[2026-07-15T06:53:12.121Z] INFO [aft-plugin] [aft] [ses_09d31a3bcffeMBTYvtDubKuV3j] semantic refresh: 1 changed, 0 new, 0 deleted, 1 total processed
[2026-07-15T06:53:16.737Z] INFO [aft-plugin] [ses_09b734d9affe5pdAOJ7kOjpCkT] perf tool=bash total=157ms pre=0ms bridge=157ms post=0ms
[2026-07-15T06:53:16.954Z] INFO [aft-plugin] [ses_09b734d9affe5pdAOJ7kOjpCkT] perf tool=bash total=352ms pre=0ms bridge=352ms post=0ms
[2026-07-15T06:53:20.943Z] INFO [aft-plugin] [ses_09b734d9affe5pdAOJ7kOjpCkT] perf tool=read total=2ms pre=1ms bridge=1ms post=0ms
[2026-07-15T06:53:24.258Z] INFO [aft-plugin] [ses_09b734d9affe5pdAOJ7kOjpCkT] perf tool=read total=2ms pre=1ms bridge=1ms post=0ms
[2026-07-15T06:53:33.340Z] INFO [aft-plugin] [ses_09b734d9affe5pdAOJ7kOjpCkT] perf tool=glob total=9ms pre=1ms bridge=8ms post=0ms
[2026-07-15T06:53:44.168Z] INFO [aft-plugin] [ses_09b734d9affe5pdAOJ7kOjpCkT] perf tool=bash total=3120ms pre=0ms bridge=3120ms post=0ms
[2026-07-15T06:53:51.384Z] INFO [aft-plugin] [ses_09b734d9affe5pdAOJ7kOjpCkT] perf tool=bash total=234ms pre=0ms bridge=233ms post=0ms
[2026-07-15T06:53:55.026Z] INFO [aft-plugin] [ses_09b734d9affe5pdAOJ7kOjpCkT] perf tool=read total=3ms pre=1ms bridge=1ms post=0ms
[2026-07-15T06:54:04.753Z] INFO [aft-plugin] [ses_09b734d9affe5pdAOJ7kOjpCkT] perf tool=aft_search total=12ms pre=0ms bridge=12ms post=0ms
[2026-07-15T06:54:07.857Z] INFO [aft-plugin] [ses_09b734d9affe5pdAOJ7kOjpCkT] perf tool=read total=3ms pre=1ms bridge=1ms post=0ms
[2026-07-15T06:55:06.644Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=read total=7ms pre=3ms bridge=4ms post=0ms
[2026-07-15T06:55:06.768Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=read total=5ms pre=3ms bridge=1ms post=0ms
[2026-07-15T06:55:06.817Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=read total=26ms pre=1ms bridge=25ms post=0ms
[2026-07-15T06:55:06.914Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=aft_search total=76ms pre=22ms bridge=53ms post=0ms
[2026-07-15T06:55:07.072Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=bash total=138ms pre=0ms bridge=137ms post=0ms
[2026-07-15T06:55:18.613Z] INFO [aft-plugin] [ses_09b95227bffew3phws5srZSA5O] perf tool=read total=2ms pre=1ms bridge=1ms post=0ms

Usernames and home paths have been stripped from this report.

[alfonso-aft]

Thanks — this is a real gap and your read of it is right. What happens: when a long bash task's output is truncated, the footer points at the task's artifact file under the AFT storage root; that path is outside your workspace, so the agent's read triggers OpenCode's external-directory prompt and stalls unattended runs. v0.47.0 already validates these reads server-side (session-scoped task registry) when restrict_to_project_root is enabled, but in the default configuration the prompt still fires. The fix we'll ship next is to skip the external-directory prompt for exactly these session-owned artifact paths (Rust validates ownership regardless), so autonomous flows stop halting. Until then, agents can use bash_status with the task id instead of reading the artifact path — same content, no prompt.