caMicroscope
Can't seem to build and start caMicroscope distribution docker instance to run the platform on my Ubuntu 22.04 Machine #668
Replies: 5 comments 4 replies
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Funny enough I have set up the same project on Gitpod and it works fine but it just doesn't work on my machine. The bug must be me, I got to find it. But it seems it is an issue with the Boost C++ Library |
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I'll see if I can replicate the issue. Are you using develop.yml? What cpu architecture? |
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I'm using develop.yml file. I'm running the docker instance on a 64-bit
architecture with 4 processors. I managed to setup the container on Gitpod
and I did interact with the web platform. I added several Whole Slide
Images and tried annotation and other features.
…On Mon, Jan 22, 2024 at 4:54 PM Birm ***@***.***> wrote:
I'll see if I can replicate the issue. Are you using develop.yml? What cpu
architecture?
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I see the end of a cmake fail message in your first screenshot, can you add the whole log? |
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@Ronnie-Leon76 We've tried some fixes; does your issue persist? |
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Still the same issue. I have an image with the full CMake error log. There is an issue with the library used in the Orthanc_indexer microservice |
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Sorry for the late reply. I have been busy with some work. |
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It is so funny that it works on Gitpod but not on my machine.
I have been using Gitpod to go through the codebase to understand the various components. I have been going through resources on multi-channel support since my interest is in image processing but I see there is an image classification feature that I can implement to improve caMicroscope digital pathology slide viewing web platform. |
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give me few hours, will tirage on my local machine |
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I'm getting the error shown in the snapshot below. It's associated with the dicomsrv service defined in the develop.yml. I looked at the issues of the distro repo and @birm advised to use the following docker command:
docker-compose -f develop.yml upinstead of using the caMicroscope.yml file but I'm getting an issue. The error is associated with the orthanc_indexer microservice that was added. I'll appreciate any help on how to get around this. I would like to make improvements to caMicroscope by adding support for multi-channel image supportAll reactions