The data analysis of yeast PPI from AlphaFold3 is in this GitHub repo below. Instructions on how to reproduce the data are in the repo, along with figures and Jupyter files to see how they run.
https://github.com/Sabah-hoq/yeast-ppi-af3-su26/tree/main
The SPRAS-ready edge file is specifically here:
https://github.com/Sabah-hoq/yeast-ppi-af3-su26/blob/main/outputs/spras/yeast_spras.txt
The data analysis of yeast PPI from AlphaFold3 is in this GitHub repo below. Instructions on how to reproduce the data are in the repo, along with figures and Jupyter files to see how they run.
https://github.com/Sabah-hoq/yeast-ppi-af3-su26/tree/main
The SPRAS-ready edge file is specifically here:
https://github.com/Sabah-hoq/yeast-ppi-af3-su26/blob/main/outputs/spras/yeast_spras.txt